• calibayesR
• ChangeLog

calibayesR ChangeLog

• Version: 0.1.8 - Major changes.
  • XML now generated using paste - it's faster
  • New makeCaliBayesExperiments function
  • Made functions names more consistent
• Version 0.1.7
  • Updated the dependencies
• Version 0.1.6
  • Updated the wsdl file location.
• Version 0.1.5

  • Added the YeastGrowthDemo

• Version 0.1.4
  • Added predictive distribution facility using basis
• Version 0.1.3
  • Bug fixes and doc updates
• Version 0.1.2
  • Bug fixes and doc updates
• Version 0.1.1
  • Add support packages to the windows version.
• Version 0.1.0
  • Major changes to all functions. Not backwards compatible.
  • Web-services can be accessed through R.
• Version 0.09

  • The make functions can now return XML values as strings and/or files

• Version 0.08

  • ReactionName was removed from the distribution XML scheme. Local parameters are not allowed in calibayes.

  • simulatormethod and wsdl location were added to the settings XML file
• Version 0.07
  • Error distributions can now be specified for species that are defined using SBML assignment rules.
• Version 0.06
  • Windows version now included.
• Version 0.05

  • In makeDistribution and getDistribution parameters is now an optional argument.

• Version 0.04

  • makeSettings now has default arguments for burn, thin and block.

• Version 0.03

  • makeSettings no longer takes an argument for the number of iterations or particles. Rather the inference engine calculates the number of iterations required via: burn-in + thin * length(prior distribution).

• Version 0.02

  • All make functions now call the corresponding check functions by default.

  • makeSettings now uses the argument particles, and calculates the required number of iterations.

  • getDistribution returns a list of data frames of the same structure that makeDistribution requires.

  • Minor corrections to the documentation.
• Version 0.01
  • The first standalone release.